You know how Logic pops up that dialog box with a text file that is so easy to ignore during an ECO process as you jump to Layout? The issue is described in that text file.
Nothing personal, this is my standard process (wait, it didn't work that time? Why not? On yeah...)
Actually for that particular problem, it was a reference designatior change that fixed it. No errors indicated that was the problem.
Soon I will be working with dx entry to see if that is any better than power logic. Hopefully it is. otherwise it's Kicad!