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Beginning with PADS 2007.4; Window settings are stored in the file DxDesigner.wsp found in the first wdir directory.
Make a backup and delete the file to restore the window panes to the default state.
In DxDesigner "2005" versions, the window panes were stored in the registry. Review Technote MG26162
Thank you Gary for the info. I had looked in the registry, but did not look in that area. I did resolved the situation a slightly different way. I undocked another window (DxDatabook) and then redocked forcing DxDesigner to put the DxDatabook window next to the "missing" Output Log window. Output log window magically re-appeared.